STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKS1Meckel syndrome type 1 protein isoform X1. (606 aa)    
Predicted Functional Partners:
B9D1
B9 domain-containing protein 1.
    
 0.996
TMEM67
Transmembrane protein 67.
     
 0.991
B9D2
B9 domain-containing protein 2 isoform X1.
    
 0.991
AHI1
Jouberin.
    
 0.977
ENSPVIP00000013903
annotation not available
    
 0.971
TMEM216
Transmembrane protein 216 isoform X1.
     
 0.964
CC2D2A
Coiled-coil and C2 domain-containing protein 2A isoform X1.
    
 0.909
TCTN3
Tectonic-3 isoform X1.
    
 0.909
CC2D2B
Coiled-coil and C2 domain-containing protein 2A.
    
 0.909
TCTN2
Tectonic family member 2.
     
 0.906
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.