STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKS1Meckel syndrome type 1 protein isoform X1. (606 aa)    
Predicted Functional Partners:
B9D1
B9 domain-containing protein 1.
    
0.975
B9D2
B9 domain-containing protein 2 isoform X1.
    
0.972
ENSPVIP00000013903
annotation not available
    
 0.964
TMEM67
Transmembrane protein 67.
     
 0.962
TMEM231
Transmembrane protein 231.
    
 0.960
TMEM216
Transmembrane protein 216 isoform X1.
     
 0.952
TMEM107
Transmembrane protein 107.
    
 0.921
TCTN2
Tectonic family member 2.
     
 0.911
ENSPVIP00000032589
annotation not available
    
 0.902
AHI1
Jouberin.
    
 0.862
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.