Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM50Tripartite motif-containing protein 50/73/74. (473 aa)    
Predicted Functional Partners:
TRIM23
Tripartite motif-containing protein 23.
    
 0.618
WDR53
WD repeat-containing protein 53 isoform X1.
      
 0.598
RPS27A
Ribosomal protein S27a.
    
  0.590
NBAS
Neuroblastoma-amplified sequence.
    
 
 0.578
UBE2H
Ubiquitin-conjugating enzyme E2 H.
    
 
 0.555
TRIM44
Tripartite motif containing 44.
    
 
 0.509
ANXA6
Annexin A6 isoform X1.
    
 0.503
GTF2IRD1
GTF2I repeat domain containing 1.
      
 0.483
BUD23
Probable 18S rRNA (guanine-N(7))-methyltransferase.
    
 
 0.483
FKBP6
Inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1.
      
 0.475
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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