STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA3ATP-binding cassette, subfamily A (ABC1), member 3. (1644 aa)    
Predicted Functional Partners:
ENSPVIP00000021283
annotation not available
   
  
 0.846
LPCAT1
Lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase.
   
 
 0.706
ENSPVIP00000023878
annotation not available
      
 0.695
VWA3A
Von Willebrand factor A domain containing 3A.
      
 0.576
LAMP3
Lysosome-associated membrane glycoprotein 3.
   
 
 0.571
NR1H4
Bile acid receptor isoform X1.
    
 0.520
SHTN1
Shootin 1.
    
 
 0.517
VIPR2
Vasoactive intestinal polypeptide receptor 2.
      
 0.496
LOC110071310
Apolipoprotein A-IV-like isoform X1.
    
 0.491
ABCF1
ATP-binding cassette, subfamily F, member 1.
      
 0.491
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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