STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POM121CNuclear envelope pore membrane protein POM 121C. (1011 aa)    
Predicted Functional Partners:
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
     
 0.962
NUP153
Nuclear pore complex protein Nup153 isoform X1.
   
 
 0.774
NUP188
Nuclear pore complex protein Nup188.
     
 0.767
NUP98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
     
 0.701
NUP93
Nuclear pore complex protein Nup93 isoform X1.
   
 0.690
NUP35
Nuclear pore complex protein Nup53.
   
 
 0.679
NUP50
Nuclear pore complex protein Nup50 isoform X1.
   
 
 0.678
NUP43
Nuclear pore complex protein Nup43.
     
 0.677
NUP155
Nuclear pore complex protein Nup155.
    
  0.657
NUP42
Nucleoporin 42.
   
 
  0.640
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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