STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTNL2Smoothelin like 2. (429 aa)    
Predicted Functional Partners:
PDLIM4
PDZ and LIM domain protein 1/2/3/4.
   
 
  0.805
PDLIM2
PDZ and LIM domain protein 1/2/3/4.
   
 
 0.758
PDLIM3
PDZ and LIM domain 3.
   
 
  0.693
PDLIM7
PDZ and LIM domain 7.
   
 
 0.683
EHBP1L1
EH domain-binding protein 1-like protein 1.
  
 
0.639
ABLIM2
Actin binding LIM protein family member 2.
      
 0.612
EHBP1
EH domain-binding protein 1 isoform X1.
   
 
0.610
SMTNL1
Smoothelin-like protein 1.
  
  
 
0.609
LOC110089284
Transmembrane protein 14C-like.
      
 0.559
ZNHIT3
Zinc finger HIT domain-containing protein 3.
      
 0.519
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.