Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM248Transmembrane protein 248. (318 aa)    
Predicted Functional Partners:
TSPAN5
Tetraspanin 5.
    
   0.615
FAM49B
Protein FAM49B.
      
 0.605
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 
  0.544
DCTN4
Dynactin subunit 4 isoform X1.
  
    0.446
LOC110072396
Shugoshin 2-like isoform X1.
     
 0.432
LOC110089307
Uncharacterized LOC110089307.
      
 0.423
SKA2
Spindle and kinetochore-associated protein 2.
     
  0.420
MKX
Homeobox protein Mohawk isoform X1.
  
     0.409
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
  
    0.401
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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