LOC110085710 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC110085710

Uncharacterized protein LOC110085710. (660 aa)

Predicted Functional Partners:

BAG3

0.691

HSPA4

0.657

HSPA9

0.611

HSPA5

0.598

HSPH1

0.590

CLPB

0.585

HSPA4L

0.581

HSP90AB1

0.536

TRAP1

0.536

TSC1

0.536

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAG3	HSP90AB1	ENSPVIP00000018316	ENSPVIP00000002213	BAG family molecular chaperone regulator 3.	Heat shock protein HSP 90-beta.	0.938
BAG3	HSPA4	ENSPVIP00000018316	ENSPVIP00000009769	BAG family molecular chaperone regulator 3.	Heat shock 70 kDa protein 4 isoform X1.	0.948
BAG3	HSPA4L	ENSPVIP00000018316	ENSPVIP00000002441	BAG family molecular chaperone regulator 3.	Heat shock 70 kDa protein 4L.	0.862
BAG3	HSPA5	ENSPVIP00000018316	ENSPVIP00000028693	BAG family molecular chaperone regulator 3.	Endoplasmic reticulum chaperone BiP.	0.885
BAG3	HSPA9	ENSPVIP00000018316	ENSPVIP00000025296	BAG family molecular chaperone regulator 3.	Stress-70 protein, mitochondrial.	0.854
BAG3	HSPH1	ENSPVIP00000018316	ENSPVIP00000028279	BAG family molecular chaperone regulator 3.	Heat shock protein 105 kDa.	0.869
BAG3	LOC110085710	ENSPVIP00000018316	ENSPVIP00000009634	BAG family molecular chaperone regulator 3.	Uncharacterized protein LOC110085710.	0.691
BAG3	TRAP1	ENSPVIP00000018316	ENSPVIP00000003338	BAG family molecular chaperone regulator 3.	Heat shock protein 75 kDa, mitochondrial.	0.938
BAG3	TSC1	ENSPVIP00000018316	ENSPVIP00000018365	BAG family molecular chaperone regulator 3.	TSC complex subunit 1.	0.938
CLPB	HSP90AB1	ENSPVIP00000028076	ENSPVIP00000002213	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock protein HSP 90-beta.	0.728
CLPB	HSPA4	ENSPVIP00000028076	ENSPVIP00000009769	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock 70 kDa protein 4 isoform X1.	0.785
CLPB	HSPA4L	ENSPVIP00000028076	ENSPVIP00000002441	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock 70 kDa protein 4L.	0.775
CLPB	HSPA5	ENSPVIP00000028076	ENSPVIP00000028693	ATP-dependent Clp protease ATP-binding subunit ClpB.	Endoplasmic reticulum chaperone BiP.	0.732
CLPB	HSPA9	ENSPVIP00000028076	ENSPVIP00000025296	ATP-dependent Clp protease ATP-binding subunit ClpB.	Stress-70 protein, mitochondrial.	0.879
CLPB	HSPH1	ENSPVIP00000028076	ENSPVIP00000028279	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock protein 105 kDa.	0.775
CLPB	LOC110085710	ENSPVIP00000028076	ENSPVIP00000009634	ATP-dependent Clp protease ATP-binding subunit ClpB.	Uncharacterized protein LOC110085710.	0.585
CLPB	TRAP1	ENSPVIP00000028076	ENSPVIP00000003338	ATP-dependent Clp protease ATP-binding subunit ClpB.	Heat shock protein 75 kDa, mitochondrial.	0.728
CLPB	TSC1	ENSPVIP00000028076	ENSPVIP00000018365	ATP-dependent Clp protease ATP-binding subunit ClpB.	TSC complex subunit 1.	0.728
HSP90AB1	BAG3	ENSPVIP00000002213	ENSPVIP00000018316	Heat shock protein HSP 90-beta.	BAG family molecular chaperone regulator 3.	0.938
HSP90AB1	CLPB	ENSPVIP00000002213	ENSPVIP00000028076	Heat shock protein HSP 90-beta.	ATP-dependent Clp protease ATP-binding subunit ClpB.	0.728