Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCC1LRCC1-like G exchanging factor-like protein. (471 aa)    
Predicted Functional Partners:
TRUB2
Probable tRNA pseudouridine synthase 2 isoform X1.
    
 0.950
NME6
Nucleoside diphosphate kinase 6-like.
    
 
 0.941
MTERF3
Transcription termination factor 3, mitochondrial isoform X1.
    
  0.878
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
 
 0.851
PLA2G6
85/88 kDa calcium-independent phospholipase A2 isoform X1.
   
   0.719
APOB
LOW QUALITY PROTEIN: apolipoprotein B-100.
      
 0.696
RPUSD3
RNA pseudouridylate synthase domain-containing protein 3 isoform X1.
    
 0.664
RPUSD4
RNA pseudouridylate synthase domain-containing protein 4.
    
 0.664
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 0.662
ADA
Adenosine deaminase isoform X1.
    
 
 0.653
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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