STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REXO1RNA exonuclease 1 homolog isoform X1. (1200 aa)    
Predicted Functional Partners:
REXO2
Oligoribonuclease, mitochondrial.
   
 0.954
REXO5
Putative RNA exonuclease NEF-sp.
     
0.906
PAN3
PAB-dependent poly(A)-specific ribonuclease subunit PAN3.
    
 0.800
PCNA
Proliferating cell nuclear antigen isoform X1.
  
 0.720
DDX51
DEAD-box helicase 51.
  
 0.642
DUS3L
Dihydrouridine synthase 3 like.
   
  
 0.572
WDR61
WD repeat-containing protein 61.
      
 0.570
LEO1
RNA polymerase-associated protein LEO1.
    
 
 0.563
PPIE
Peptidyl-prolyl cis-trans isomerase E.
      
 0.560
EXOSC10
Exosome component 10.
   
 0.552
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.