Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TNNT2Troponin T, cardiac muscle. (215 aa)    
Predicted Functional Partners:
TNNC1
Troponin C, slow skeletal and cardiac muscles isoform X1.
   
 0.991
TNNI3
Troponin I3, cardiac type.
   
 0.986
TPM1
Tropomyosin alpha-1 chain isoform X1.
   
 0.969
TPM2-2
Tropomyosin beta chain isoform X1.
   
 0.969
TPM3
Tropomyosin alpha-3 chain isoform X1.
   
 0.969
TNNI2
Troponin I, fast skeletal muscle isoform X1.
  
 0.956
LOC110073536
Actin, aortic smooth muscle-like isoform X1.
   
 0.929
ACTC1
Actin, alpha cardiac muscle 1.
   
 0.929
TNNI1
LOW QUALITY PROTEIN: troponin I, slow skeletal muscle.
  
 0.925
TNNC2
Troponin C, skeletal muscle.
   
 0.915
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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