STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATMINATM interactor. (710 aa)    
Predicted Functional Partners:
UBR5
E3 ubiquitin-protein ligase UBR5 isoform X1.
    
 
 0.789
DYNLL1
Dynein light chain 1, cytoplasmic.
    
 0.701
DYNLL2
Dynein light chain 2, cytoplasmic.
    
 0.701
WRNIP1
Putative ATPase.
    
 
 0.654
ATM
Serine-protein kinase ATM.
    
 0.615
ENSPVIP00000019251
annotation not available
    
 0.615
FAN1
Fanconi-associated nuclease 1.
      
 0.480
CHEK2
Serine/threonine-protein kinase CHEK2.
    
 
 0.470
FIBCD1
Fibrinogen C domain-containing protein 1.
     
 0.449
IARS1
Isoleucine--tRNA ligase, cytoplasmic.
    
 
 0.441
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.