STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX11Transcription factor SOX11/12 (SOX group C). (442 aa)    
Predicted Functional Partners:
TCF7
Transcription factor 7 isoform X1.
    
 0.616
CTNNB1
Catenin beta-1 isoform X1.
    
 0.590
SOX5
Transcription factor SOX5/6/13 (SOX group D).
   
 0.563
LEF1
Lymphoid enhancer binding factor 1.
    
 0.545
TCF7L2
Transcription factor 7-like 2 isoform X1.
    
 0.528
TCF7L1
Transcription factor 7-like 1.
    
 0.528
JUP
Junction plakoglobin isoform X1.
    
 0.517
SOX13
Transcription factor SOX5/6/13 (SOX group D).
   
 0.483
LOC110070984
POU domain, class 5, transcription factor 1-like isoform X1.
    
 0.478
NISCH
Nischarin isoform X1.
      
 0.477
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.