STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC11Collectin sub-family member 11. (271 aa)    
Predicted Functional Partners:
ENSPVIP00000001129
annotation not available
    
 0.967
COLEC10
Collectin sub-family member 10.
   
 0.949
MASP2
Mannan binding lectin serine peptidase 2.
    
 0.735
ENSPVIP00000029163
annotation not available
    
 0.735
C1S
Complement component 1, s subcomponent.
    
 0.694
C1R
Complement component 1, r subcomponent.
    
 0.642
CTSO
Cathepsin O.
     
 0.590
LITAF
Lipopolysaccharide-induced tumor necrosis factor-alpha factor isoform X1.
      
 0.571
ENSPVIP00000020121
annotation not available
  
 
  0.494
TNN
Tenascin N.
    
 0.485
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.