Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (580 aa)    
Predicted Functional Partners:
VPS51
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog.
   
 
 0.978
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 
 0.978
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
    
 
 0.976
VPS50
Syndetin.
    
 
 0.971
VPS52
VPS52 subunit of GARP complex.
    
 
 0.957
CCDC186
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.701
ILVBL
Acetolactate synthase-like protein isoform X1.
      
 0.695
TRAPPC12
Trafficking protein particle complex subunit 12.
      
 0.693
CPD
Carboxypeptidase D.
      
 0.688
RNF144A
E3 ubiquitin-protein ligase RNF144A.
      
 0.647
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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