STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (580 aa)    
Predicted Functional Partners:
VPS51
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog.
   
 0.987
VPS50
Syndetin.
    
 0.984
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 0.982
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
    
 0.980
VPS52
VPS52 subunit of GARP complex.
    
 0.969
CCDC186
Coiled-coil domain-containing protein 186 isoform X1.
      
 0.679
THOC6
THO complex subunit 6 homolog isoform X1.
    
 0.675
TRIM23
Tripartite motif-containing protein 23.
    
 
 0.619
CPD
Carboxypeptidase D.
      
 0.599
UNC13D
Unc-13 homolog D.
      
 0.581
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.