Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TAF1DTATA box-binding protein-associated factor RNA polymerase I subunit D. (195 aa)    
Predicted Functional Partners:
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.998
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.992
HINT1
Histidine triad nucleotide-binding protein 1.
    
 0.928
GCNA
Acidic repeat-containing protein isoform X1.
    
 0.904
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.851
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.821
UBTF
Nucleolar transcription factor 1 isoform X1.
    
 0.807
EAF1
ELL-associated factor 1.
    
   0.780
TTF1
Cyclin-D-binding Myb-like transcription factor 1.
   
 
 0.778
TBPL1
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.750
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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