STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1DTATA box-binding protein-associated factor RNA polymerase I subunit D. (195 aa)    
Predicted Functional Partners:
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.985
GCNA
Acidic repeat-containing protein isoform X1.
    
 0.967
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.942
HINT1
Histidine triad nucleotide-binding protein 1.
    
 0.834
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.808
GLOD5
Glyoxalase domain containing 5.
    
 0.759
TBPL1
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.732
TTF1
Cyclin-D-binding Myb-like transcription factor 1.
     
 0.699
UBTF
Nucleolar transcription factor 1 isoform X1.
    
 0.676
FHIT
Bis(5'-adenosyl)-triphosphatase.
    
 0.639
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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