STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PXDNPeroxidasin homolog. (1297 aa)    
Predicted Functional Partners:
ENSPVIP00000003289
annotation not available
      
 0.557
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
      
 0.556
LOC110089918
Alpha-fetoprotein-like.
   
  
 0.556
GFAP
Glial fibrillary acidic protein.
   
  
 0.543
MBP
Myelin basic protein.
   
  
 0.518
BDNF
Brain-derived neurotrophic factor isoform X1.
   
  
 0.503
ENSPVIP00000013883
annotation not available
      
 0.493
GAPDH
Glyceraldehyde 3-phosphate dehydrogenase.
      
 0.492
FOS
Proto-oncogene protein c-fos.
     
 0.482
BECN1
Beclin-1.
      
 0.477
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.