STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBPL1Transcription initiation factor TFIID TATA-box-binding protein. (186 aa)    
Predicted Functional Partners:
GTF2A1
Transcription initiation factor IIA subunit 1 isoform X1.
   
 0.975
GTF2A2
Transcription initiation factor TFIIA small subunit.
   
 0.963
GTF2B
Transcription initiation factor TFIIB.
   
 0.923
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
  
 
0.914
GTF2A1L
Transcription initiation factor TFIIA large subunit.
   
 0.914
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
  
 
0.911
TAF6
TATA-box binding protein associated factor 6.
   
 0.886
ENSPVIP00000012999
annotation not available
   
 0.864
TAF9
TATA-box binding protein associated factor 9.
   
 0.860
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
    
 0.859
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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