STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKIV2LSki2 like RNA helicase. (1181 aa)    
Predicted Functional Partners:
TTC37
Tetratricopeptide repeat protein 37.
   
 0.998
WDR61
WD repeat-containing protein 61.
    
 0.993
EXOSC9
Exosome complex component RRP45 isoform X1.
   
 0.975
EXOSC3
Exosome complex component RRP40.
   
 0.968
EXOSC2
Exosome complex component RRP4.
   
 0.962
ENSPVIP00000029685
annotation not available
   
 0.955
EXOSC1
Exosome complex component CSL4.
   
 0.951
XRN1
5'-3' exoribonuclease 1 isoform X1.
   
 
 0.945
HBS1L
Elongation factor 1 alpha-like protein.
    
 0.945
EXOSC7
Exosome complex component RRP42.
   
 0.935
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.