STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF5Protein YIPF5 isoform X1. (252 aa)    
Predicted Functional Partners:
DERL1
Derlin-1.
   
 0.789
YIF1B
Protein transport protein YIF1.
   
 
 0.664
YIF1A
Protein transport protein YIF1.
   
 
 0.664
YIPF3
Protein YIPF3.
   
 
 0.613
DERL3
Uncharacterized LOC110081966.
   
 0.591
DERL2
Derlin-2/3.
   
 0.591
YIPF2
Protein YIPF1/2.
   
 
 0.555
YIPF1
Protein YIPF1/2.
   
 
 0.555
RNF139
E3 ubiquitin-protein ligase RNF139.
    
 0.551
RAB1A
Ras-related protein Rab-1A.
   
 
 0.535
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.