STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF2Elongation factor 2. (858 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.996
EEF1G
Elongation factor 1-gamma.
   
 
 0.995
RPLP0
Large subunit ribosomal protein LP0.
  
 0.987
RPSA
Small subunit ribosomal protein SAe.
  
 0.985
RPL4
Large subunit ribosomal protein L4e.
  
 0.983
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
   
 
 0.980
RPS3
Small subunit ribosomal protein S3e.
  
 0.980
RPL8
Large subunit ribosomal protein L8e.
  
 0.980
RPL6
Large subunit ribosomal protein L6e.
  
 0.977
RPL11
60S ribosomal protein L11 isoform X1.
  
 0.973
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.