Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM27RNA-binding protein 27 isoform X1. (1008 aa)    
Predicted Functional Partners:
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.951
RBM26
RNA-binding protein 26 isoform X1.
   
 
  0.941
ZC3H3
Zinc finger CCCH domain-containing protein 3 isoform X1.
   
 
 0.941
YTHDC1
YTH domain-containing protein 1 isoform X1.
   
 
 0.940
YTHDC2
Probable ATP-dependent RNA helicase YTHDC2 isoform X1.
   
 
 0.932
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
   
 0.882
MTREX
Superkiller viralicidic activity 2-like 2.
   
 0.823
PABPN1L
Embryonic polyadenylate-binding protein 2.
    
 0.752
LOC110087838
Polyadenylate-binding protein 2-like.
    
 0.752
CPSF4
Cleavage and polyadenylation specificity factor subunit 4.
   
 
 0.734
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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