STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXODecapping and exoribonuclease protein. (410 aa)    
Predicted Functional Partners:
XRN2
5'-3' exoribonuclease 2.
   
 0.998
EXOSC7
Exosome complex component RRP42.
   
  0.994
ENSPVIP00000029685
annotation not available
   
 0.922
EXOSC5
Exosome complex component RRP46.
   
 0.913
EXOSC1
Exosome complex component CSL4.
   
 
  0.899
EXOSC9
Exosome complex component RRP45 isoform X1.
   
 
  0.898
EXOSC3
Exosome complex component RRP40.
   
 
  0.890
POP5
Ribonuclease P/MRP protein subunit POP5 isoform X1.
   
 
  0.890
TSEN34
TRNA-splicing endonuclease subunit Sen34.
   
 
  0.889
RPP21
Ribonuclease P/MRP subunit p21.
   
 
  0.889
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.