STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110072479Receptor expression-enhancing protein 6-like. (183 aa)    
Predicted Functional Partners:
SNX15
Sorting nexin-15.
    
   0.685
FAM118A
Protein FAM118A isoform X1.
    
 
 0.573
RHBDD3
Rhomboid domain-containing protein 3.
      
 0.563
ENSPVIP00000008298
annotation not available
      
 0.550
RTN3
Reticulon-3 isoform X1.
    
 
 0.510
RTN1
Reticulon-1-like.
    
 
 0.510
RTN4
Reticulon-4 isoform X1.
    
 
 0.510
RTN2
Reticulon-2.
    
 
 0.510
LNPK
Endoplasmic reticulum junction formation protein lunapark.
    
 
 0.486
DNAJC18
DnaJ homolog subfamily C member 18 isoform X1.
   
  
 0.483
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.