STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1Transcription elongation regulator 1 isoform X1. (1074 aa)    
Predicted Functional Partners:
CDC40
Pre-mRNA-processing factor 17.
    
 0.978
RBM25
RNA-binding protein 25 isoform X1.
   
 
 0.955
PPP1R8
Nuclear inhibitor of protein phosphatase 1 isoform X1.
   
 
  0.940
DNAJC8
DnaJ homolog subfamily C member 8 isoform X1.
   
 
  0.938
SUGP1
SURP and G-patch domain-containing protein 1.
   
 
  0.937
PRPF38A
Pre-mRNA-splicing factor 38A.
   
 0.926
HTATSF1
HIV Tat-specific factor 1.
   
 
 0.920
RBM22
Pre-mRNA-splicing factor RBM22/SLT11.
   
 0.916
U2SURP
U2 snRNP-associated SURP motif-containing protein isoform X1.
   
   0.908
MFAP1
Microfibril associated protein 1.
   
 0.901
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.