Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DDX39BATP-dependent RNA helicase UAP56/SUB2. (498 aa)    
Predicted Functional Partners:
ALYREF
THO complex subunit 4.
   
 0.977
SARNP
SAP domain-containing ribonucleoprotein isoform X1.
   
 0.947
THOC2
THO complex subunit 2.
   
 0.941
RBM8A
RNA-binding protein 8A.
   
 0.936
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.935
THOC1
THO complex subunit 1 isoform X1.
   
 0.933
THOC3
THO complex 3.
    
 0.933
THOC5
THO complex subunit 5 homolog isoform X1.
   
 0.932
THOC6
THO complex subunit 6 homolog isoform X1.
   
 0.917
MAGOH
Protein mago nashi homolog.
   
 0.911
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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