Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SH3YL1SH3 domain-containing YSC84-like protein 1. (345 aa)    
Predicted Functional Partners:
SH3D19
SH3 domain-containing protein 19 isoform X1.
    
   0.894
SMAP2
Stromal membrane-associated protein 2.
    
 
 0.780
VPS37B
Vacuolar protein sorting-associated protein 37B.
    
   0.734
ANKRD54
Ankyrin repeat domain-containing protein 54.
    
 
 0.702
MVK
Mevalonate kinase.
    
   0.665
ACP1
Acid phosphatase 1.
      
 0.634
SMAP1
Small ArfGAP 1.
    
 
 0.629
AR
Androgen receptor-like.
    
 
 0.627
WAS
WASP actin nucleation promoting factor.
    
 
 0.625
WASL
WASP like actin nucleation promoting factor.
    
 
 0.625
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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