STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRPTestis development-related protein isoform X1. (319 aa)    
Predicted Functional Partners:
FBXO38
F-box only protein 38.
      
 0.905
RASSF9
Ras association domain-containing protein 9 isoform X1.
      
 0.568
SPATA2
Spermatogenesis-associated protein 2.
      
 0.563
EPDR1
Mammalian ependymin-related protein 1.
      
 0.545
TERB1
Telomere repeat binding bouquet formation protein 1.
      
 0.508
ENO4
Enolase 4.
      
 0.474
SMOC2
SPARC-related modular calcium-binding protein 2.
      
 0.468
SMOC1
SPARC-related modular calcium-binding protein 1 isoform X1.
      
 0.468
LOC110075641
SPARC-related modular calcium-binding protein 1-like.
      
 0.468
MIPOL1
Mirror-image polydactyly gene 1 protein isoform X1.
      
 0.460
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.