Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
CLN8Ceroid-lipofuscinosis neuronal protein 8. (288 aa)    
Predicted Functional Partners:
CLN6
Ceroid-lipofuscinosis neuronal protein 6 isoform X1.
      
 0.904
CLN5
Ceroid-lipofuscinosis neuronal protein 5.
      
 0.901
CLN3
Battenin isoform X1.
      
 0.877
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.870
MFSD8
MFS transporter, ceroid-lipofuscinosis neuronal protein 7.
      
 0.847
TPP1
Tripeptidyl-peptidase 1.
    
 
 0.677
LRGUK
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.631
ARSG
Arylsulfatase G.
      
 0.618
ATP13A2
ATPase cation transporting 13A2.
   
  
 0.615
CTSF
Cathepsin F.
      
 0.615
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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