STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L1Probable C-mannosyltransferase DPY19L1. (701 aa)    
Predicted Functional Partners:
CCDC62
Coiled-coil domain containing 62.
      
 0.611
TSR3
TSR3 ribosome maturation factor.
      
 0.587
SPATA16
Spermatogenesis-associated protein 16 isoform X1.
      
 0.584
PICK1
PRKCA-binding protein.
      
 0.563
CASC1
Cancer susceptibility 1.
   
    0.550
FBXL21P
F-box and leucine-rich repeat protein 21.
      
 0.548
GOPC
Golgi-associated PDZ and coiled-coil motif-containing protein.
      
 0.532
TSR2
Pre-rRNA-processing protein TSR2 homolog.
      
 0.513
TSR1
Pre-rRNA-processing protein TSR1 homolog.
      
 0.472
SPACA1
Sperm acrosome membrane-associated protein 1.
      
 0.445
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.