STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BOD1Biorientation of chromosomes in cell division protein 1. (171 aa)    
Predicted Functional Partners:
CXXC1
CXXC finger protein 1.
    
 0.680
RBBP5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.664
NEU1
Sialidase-1 isoform X1.
  
 0.624
CTSA
Cathepsin A.
   
 0.622
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1.
    
 0.620
DPY30
Protein dpy-30 homolog.
    
 0.573
WDR82
WD repeat-containing protein 82 isoform X1.
    
 0.572
WDR5B
WD repeat-containing protein 5.
   
 0.564
GUSB
Beta-glucuronidase.
  
 0.522
SKA1
Spindle and kinetochore-associated protein 1 isoform X1.
     
 0.510
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.