Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCF1ATP-binding cassette, subfamily F, member 1. (689 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
   
 
 0.850
ABCE1
ATP-binding cassette, sub-family E, member 1.
   
 
 0.780
POLR1B
DNA-directed RNA polymerase I subunit RPA2.
   
  
 0.770
EIF2S1
Eukaryotic translation initiation factor 2 subunit 1 isoform X1.
   
 0.744
RPL18
Large subunit ribosomal protein L18e.
   
 
 0.726
RPS18
Ribosomal protein S18.
  
 
 0.718
EIF2S2
Eukaryotic translation initiation factor 2 subunit 2.
   
 
 0.708
ABCB7
ATP binding cassette subfamily B member 7.
      
 0.696
NDUFA12
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12.
      
 0.694
GJA1
Gap junction alpha-1 protein.
      
 0.689
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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