STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERGIC1Endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X1. (290 aa)    
Predicted Functional Partners:
GTPBP3
TRNA modification GTPase GTPBP3, mitochondrial isoform X1.
  
 0.917
CAPRIN1
Caprin-1 isoform X1.
   
  
 0.683
ALKAL2
Protein FAM150B.
      
 0.679
SURF4
ER-derived vesicles protein.
   
 
 0.674
CYP7B1
25/26-hydroxycholesterol 7alpha-hydroxylase.
    
 0.661
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
     
 0.634
GTSE1
G-2 and S-phase expressed protein 1.
  
 0.613
TRMU
TRNA-5-taurinomethyluridine 2-sulfurtransferase.
  
 0.613
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
  
 0.531
LMAN1
Lectin, mannose-binding 1.
   
  
 0.523
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.