STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL21PF-box and leucine-rich repeat protein 21. (436 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1.
   
 0.732
CUL1
Cullin-1 isoform X1.
    
 0.693
NEDD8
Ubiquitin-like protein Nedd8.
    
 0.616
LOC110088436
Coiled-coil domain-containing protein 92.
      
 0.610
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.566
COMMD4
COMM domain-containing protein 4.
    
 0.556
DPY19L1
Probable C-mannosyltransferase DPY19L1.
      
 0.548
CUL3
Cullin-3 isoform X1.
    
 0.546
CRY2
Cryptochrome-2.
    
 0.542
TDRP
Testis development-related protein isoform X1.
      
 0.517
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.