STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HPSEHeparanase. (473 aa)    
Predicted Functional Partners:
HPSE2
Inactive heparanase-2.
  
  
0.904
IDS
Iduronate 2-sulfatase isoform X1.
     
 0.901
RARS2
Probable arginine--tRNA ligase, mitochondrial.
      
 0.679
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1.
      
 0.679
SEPTIN8
Septin-8 isoform X1.
      
 0.674
GPN2
GPN-loop GTPase 2 isoform X1.
      
 0.674
SDC1
Syndecan 1.
     
 0.596
SDC2
Syndecan-2 isoform X1.
     
 0.478
BSDC1
BSD domain-containing protein 1 isoform X1.
      
 0.475
SDC3
Syndecan 3.
     
 0.474
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.