STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPA1Transient receptor potential cation channel subfamily A member 1. (1107 aa)    
Predicted Functional Partners:
TRPM2
Transient receptor potential cation channel subfamily M member 2.
     
 0.807
TRPV4
Transient receptor potential cation channel subfamily V member 4.
     
 0.805
HIF1AN
Hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase).
    
   0.763
TRPV2
Transient receptor potential cation channel subfamily V member 2.
     
 0.746
TRPC1
Transient receptor potential cation channel subfamily C member 1.
   
 
 0.726
TRPV1
Transient receptor potential cation channel subfamily V member 1.
     
0.726
TRPV3
Transient receptor potential cation channel subfamily V member 3.
     
0.726
TRPM8
Transient receptor potential cation channel subfamily M member 8.
     
 0.720
TRH
Thyrotropin releasing hormone.
      
 0.581
CNPY3
Protein canopy homolog 3.
      
 0.572
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.