STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTX2Homeobox protein OTX2. (382 aa)    
Predicted Functional Partners:
HHEX
Hematopoietically-expressed homeobox protein HHEX isoform X1.
   
  
 0.561
ZNF366
Zinc finger protein 366.
    
 
 0.549
FOXA1
Forkhead box A1.
   
 
 0.530
ATOH7
Protein atonal homolog 7.
      
 0.524
FGF5
Fibroblast growth factor 5.
    
 
 0.472
ASCL1
Achaete-scute complex protein.
   
  
 0.470
RORB
RAR-related orphan receptor beta.
    
 
 0.466
GLIS1
Zinc finger protein GLIS1/3.
    
 
 0.443
HES1
Transcription factor HES-1 isoform X1.
    
 
 0.440
DCX
Neuronal migration protein doublecortin isoform X1.
      
 0.431
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.