STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDHD3Haloacid dehalogenase-like hydrolase domain-containing protein 3. (242 aa)    
Predicted Functional Partners:
NT5E
5'-nucleotidase.
   
 
 0.760
PSAT1
Phosphoserine aminotransferase.
  
 
 0.760
KLHL29
Kelch-like protein 29 isoform X1.
   
 
 0.605
LOC110090826
Purine nucleoside phosphorylase-like.
  
 
 0.593
PNP
Purine nucleoside phosphorylase isoform X1.
  
 
 0.593
MTAP
S-methyl-5'-thioadenosine phosphorylase.
  
 
 0.574
NDRG3
Protein NDRG3 isoform X1.
    
 
 0.572
SHMT1
Serine hydroxymethyltransferase, cytosolic isoform X1.
    
 0.567
SHMT2
Serine hydroxymethyltransferase, mitochondrial.
    
 0.567
TSPEAR
Thrombospondin-type laminin G domain and EAR repeat-containing protein.
      
 0.559
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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