STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATAD1GATA zinc finger domain-containing protein 1. (395 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
    
 
 0.886
MORF4L1
Mortality factor 4 like 1.
    
 
 0.746
EMSY
BRCA2-interacting transcriptional repressor EMSY isoform X1.
    
 
 0.646
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
    
 
 0.602
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
    
 
 0.602
RBBP4
Histone-binding protein RBBP4 isoform X1.
    
   0.528
TMEM101
Transmembrane protein 101 isoform X1.
      
 0.465
MRGBP
MRG/MORF4L-binding protein.
    
 
 0.460
MSL3
Male-specific lethal 3 homolog.
    
 
 0.414
SIN3A
Paired amphipathic helix protein Sin3a.
    
 
 0.413
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.