STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD7AOTU domain-containing protein 7A isoform X1. (933 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7 isoform X1.
   
   0.734
UBC
Polyubiquitin-C.
   
  0.729
RPS27A
Ribosomal protein S27a.
   
  0.713
ACBD4
Acyl-CoA-binding domain-containing protein 4.
    
 
 0.682
GLO1
Lactoylglutathione lyase.
      
 0.679
NFS1
Cysteine desulfurase, mitochondrial.
      
 0.679
LLGL2
Lethal(2) giant larvae protein homolog 2 isoform X1.
      
 0.679
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.590
LOC110072526
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.590
APC
Adenomatous polyposis coli protein isoform X1.
    
  0.548
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.