STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTNVitronectin isoform X1. (451 aa)    
Predicted Functional Partners:
SERPINE1
Plasminogen activator inhibitor 1.
   
 0.996
PLAUR
Urokinase plasminogen activator surface receptor.
    
 0.994
ITGAV
Integrin alpha V.
   
 0.985
ITGB5
Integrin beta 5.
    
 0.979
PLAU
Urokinase-type plasminogen activator.
   
 0.977
ITGB8
Integrin beta-8 isoform X1.
    
 0.975
ITGA8
Integrin alpha 8.
   
 0.962
ITGA2B
Integrin alpha-IIb.
   
 0.962
ITGB1
Integrin beta-1 isoform X1.
    
 0.957
PLAT
Tissue-type plasminogen activator isoform X1.
   
 0.952
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.