Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRCA2 | ENSPVIP00000024186 | ENSPVIP00000016815 | ENSPVIP00000024186 | Breast cancer type 2 susceptibility protein. | annotation not available | 0.822 |
BRCA2 | ERCC4 | ENSPVIP00000016815 | ENSPVIP00000000439 | Breast cancer type 2 susceptibility protein. | DNA excision repair protein ERCC-4. | 0.929 |
BRCA2 | FANCD2 | ENSPVIP00000016815 | ENSPVIP00000033808 | Breast cancer type 2 susceptibility protein. | FA complementation group D2. | 0.987 |
BRCA2 | MSH2 | ENSPVIP00000016815 | ENSPVIP00000004137 | Breast cancer type 2 susceptibility protein. | DNA mismatch repair protein MSH2. | 0.957 |
BRCA2 | MSH3 | ENSPVIP00000016815 | ENSPVIP00000034744 | Breast cancer type 2 susceptibility protein. | DNA mismatch repair protein MSH3. | 0.910 |
BRCA2 | MSH4 | ENSPVIP00000016815 | ENSPVIP00000003588 | Breast cancer type 2 susceptibility protein. | MutS protein homolog 4 isoform X1. | 0.619 |
BRCA2 | MSH6 | ENSPVIP00000016815 | ENSPVIP00000004128 | Breast cancer type 2 susceptibility protein. | DNA mismatch repair protein Msh6 isoform X1. | 0.822 |
BRCA2 | SWSAP1 | ENSPVIP00000016815 | ENSPVIP00000022709 | Breast cancer type 2 susceptibility protein. | ATPase SWSAP1. | 0.784 |
BRCA2 | ZSWIM7 | ENSPVIP00000016815 | ENSPVIP00000010816 | Breast cancer type 2 susceptibility protein. | Zinc finger SWIM domain-containing protein 7. | 0.913 |
ENSPVIP00000024186 | BRCA2 | ENSPVIP00000024186 | ENSPVIP00000016815 | annotation not available | Breast cancer type 2 susceptibility protein. | 0.822 |
ENSPVIP00000024186 | ERCC4 | ENSPVIP00000024186 | ENSPVIP00000000439 | annotation not available | DNA excision repair protein ERCC-4. | 0.800 |
ENSPVIP00000024186 | FANCD2 | ENSPVIP00000024186 | ENSPVIP00000033808 | annotation not available | FA complementation group D2. | 0.790 |
ENSPVIP00000024186 | MSH2 | ENSPVIP00000024186 | ENSPVIP00000004137 | annotation not available | DNA mismatch repair protein MSH2. | 0.989 |
ENSPVIP00000024186 | MSH3 | ENSPVIP00000024186 | ENSPVIP00000034744 | annotation not available | DNA mismatch repair protein MSH3. | 0.970 |
ENSPVIP00000024186 | MSH4 | ENSPVIP00000024186 | ENSPVIP00000003588 | annotation not available | MutS protein homolog 4 isoform X1. | 0.801 |
ENSPVIP00000024186 | SWSAP1 | ENSPVIP00000024186 | ENSPVIP00000022709 | annotation not available | ATPase SWSAP1. | 0.697 |
ERCC4 | BRCA2 | ENSPVIP00000000439 | ENSPVIP00000016815 | DNA excision repair protein ERCC-4. | Breast cancer type 2 susceptibility protein. | 0.929 |
ERCC4 | ENSPVIP00000024186 | ENSPVIP00000000439 | ENSPVIP00000024186 | DNA excision repair protein ERCC-4. | annotation not available | 0.800 |
ERCC4 | FANCD2 | ENSPVIP00000000439 | ENSPVIP00000033808 | DNA excision repair protein ERCC-4. | FA complementation group D2. | 0.964 |
ERCC4 | MSH2 | ENSPVIP00000000439 | ENSPVIP00000004137 | DNA excision repair protein ERCC-4. | DNA mismatch repair protein MSH2. | 0.979 |
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