Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDNF | EPHA2 | ENSPVIP00000034922 | ENSPVIP00000022444 | Brain-derived neurotrophic factor isoform X1. | Ephrin type-A receptor 2. | 0.716 |
BDNF | INSR | ENSPVIP00000034922 | ENSPVIP00000023499 | Brain-derived neurotrophic factor isoform X1. | Insulin receptor. | 0.742 |
BDNF | MET | ENSPVIP00000034922 | ENSPVIP00000023583 | Brain-derived neurotrophic factor isoform X1. | Hepatocyte growth factor receptor isoform X1. | 0.714 |
BDNF | NGFR | ENSPVIP00000034922 | ENSPVIP00000032351 | Brain-derived neurotrophic factor isoform X1. | Tumor necrosis factor receptor superfamily member 16. | 0.667 |
BDNF | NTF3 | ENSPVIP00000034922 | ENSPVIP00000025461 | Brain-derived neurotrophic factor isoform X1. | Neurotrophin-3 isoform X1. | 0.956 |
BDNF | NTRK2 | ENSPVIP00000034922 | ENSPVIP00000031477 | Brain-derived neurotrophic factor isoform X1. | Neurotrophic tyrosine kinase receptor type 2. | 0.974 |
BDNF | NTRK3 | ENSPVIP00000034922 | ENSPVIP00000005239 | Brain-derived neurotrophic factor isoform X1. | Neurotrophic tyrosine kinase, receptor type 3. | 0.893 |
BDNF | PDGFRA | ENSPVIP00000034922 | ENSPVIP00000003820 | Brain-derived neurotrophic factor isoform X1. | LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha. | 0.732 |
BDNF | PTK7 | ENSPVIP00000034922 | ENSPVIP00000009080 | Brain-derived neurotrophic factor isoform X1. | Inactive tyrosine-protein kinase 7. | 0.586 |
BDNF | SORT1 | ENSPVIP00000034922 | ENSPVIP00000015767 | Brain-derived neurotrophic factor isoform X1. | Sortilin isoform X1. | 0.841 |
EPHA2 | BDNF | ENSPVIP00000022444 | ENSPVIP00000034922 | Ephrin type-A receptor 2. | Brain-derived neurotrophic factor isoform X1. | 0.716 |
EPHA2 | NTF3 | ENSPVIP00000022444 | ENSPVIP00000025461 | Ephrin type-A receptor 2. | Neurotrophin-3 isoform X1. | 0.724 |
INSR | BDNF | ENSPVIP00000023499 | ENSPVIP00000034922 | Insulin receptor. | Brain-derived neurotrophic factor isoform X1. | 0.742 |
INSR | NTF3 | ENSPVIP00000023499 | ENSPVIP00000025461 | Insulin receptor. | Neurotrophin-3 isoform X1. | 0.724 |
MET | BDNF | ENSPVIP00000023583 | ENSPVIP00000034922 | Hepatocyte growth factor receptor isoform X1. | Brain-derived neurotrophic factor isoform X1. | 0.714 |
MET | NTF3 | ENSPVIP00000023583 | ENSPVIP00000025461 | Hepatocyte growth factor receptor isoform X1. | Neurotrophin-3 isoform X1. | 0.716 |
MET | PTK7 | ENSPVIP00000023583 | ENSPVIP00000009080 | Hepatocyte growth factor receptor isoform X1. | Inactive tyrosine-protein kinase 7. | 0.673 |
NGFR | BDNF | ENSPVIP00000032351 | ENSPVIP00000034922 | Tumor necrosis factor receptor superfamily member 16. | Brain-derived neurotrophic factor isoform X1. | 0.667 |
NGFR | NTF3 | ENSPVIP00000032351 | ENSPVIP00000025461 | Tumor necrosis factor receptor superfamily member 16. | Neurotrophin-3 isoform X1. | 0.781 |
NTF3 | BDNF | ENSPVIP00000025461 | ENSPVIP00000034922 | Neurotrophin-3 isoform X1. | Brain-derived neurotrophic factor isoform X1. | 0.956 |
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