STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000028267annotation not available (144 aa)    
Predicted Functional Partners:
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.929
BDP1
Transcription factor TFIIIB component B'' homolog isoform X1.
    
 0.920
POLR3F
DNA-directed RNA polymerase III subunit RPC6.
    
 0.912
ENSPVIP00000028271
annotation not available
 
      0.900
BRF1
Transcription factor IIIB 90 kDa subunit isoform X1.
 
      0.899
POLR3B
DNA-directed RNA polymerase III subunit RPC2 isoform X1.
   
 0.896
POLR3A
DNA-directed RNA polymerase III subunit RPC1.
   
 0.888
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.876
POLR3C
DNA-directed RNA polymerase III subunit RPC3.
    
 0.864
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 0.862
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.