STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHRF1E3 ubiquitin-protein ligase UHRF1. (786 aa)    
Predicted Functional Partners:
DNMT1
DNA (cytosine-5)-methyltransferase 1 isoform X1.
  
 0.927
USP7
Ubiquitin carboxyl-terminal hydrolase 7.
    
 
 0.772
LIG1
DNA ligase 1 isoform X1.
   
 
 0.697
PCNA
Proliferating cell nuclear antigen isoform X1.
   
   0.653
USP40
Ubiquitin carboxyl-terminal hydrolase 40 isoform X1.
    
 
 0.470
ENSPVIP00000022063
annotation not available
    
 
 0.470
TMEM183A
Transmembrane protein 183A isoform X1.
     
 0.443
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.439
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
 0.439
DNMT3B
DNA methyltransferase 3 beta.
   
 0.420
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.