STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQRIntron-binding protein aquarius isoform X1. (1462 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
    
 0.999
CDC5L
Cell division cycle 5-like protein.
   
 0.999
XAB2
Pre-mRNA-splicing factor SYF1.
   
 0.999
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.999
CDC40
Pre-mRNA-processing factor 17.
   
 0.998
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.997
BCAS2
Pre-mRNA-splicing factor SPF27.
    
 0.997
SNRPA1
U2 small nuclear ribonucleoprotein A.
    
 0.997
RBM22
Pre-mRNA-splicing factor RBM22/SLT11.
    
 0.997
BUD31
Bud site selection protein 31.
    
  0.996
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.