STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAIPE3 ubiquitin-protein ligase TRAIP. (295 aa)    
Predicted Functional Partners:
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.617
FANCD2
FA complementation group D2.
   
 
 0.616
FBXO5
F-box only protein 5.
   
  
 0.569
TATDN3
Putative deoxyribonuclease TATDN3 isoform X1.
      
 0.562
USP37
Ubiquitin carboxyl-terminal hydrolase 37 isoform X1.
    
 
 0.562
MBLAC1
Metallo-beta-lactamase domain-containing protein 1.
      
 0.561
SPRTN
SprT-like domain-containing protein Spartan.
      
 0.557
ENSPVIP00000007574
annotation not available
   
  
 0.544
LRR1
Leucine-rich repeat protein 1.
   
  
 0.544
MCM7
DNA replication licensing factor MCM7.
    
 
 0.527
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.