STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WARS2Tryptophan--tRNA ligase, mitochondrial. (344 aa)    
Predicted Functional Partners:
WARS1
Tryptophan--tRNA ligase, cytoplasmic.
     
 0.964
YARS1
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.820
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
  
 
 0.797
SARS2
seryl-tRNA synthetase 2, mitochondrial.
  
 
 0.794
RARS1
Arginine--tRNA ligase, cytoplasmic.
  
  
 0.775
RARS2
Probable arginine--tRNA ligase, mitochondrial.
  
  
 0.775
LARS1
Leucine--tRNA ligase, cytoplasmic isoform X1.
  
 
 0.766
LARS2
Probable leucine--tRNA ligase, mitochondrial.
  
 
 0.766
VARS1
Valyl-tRNA synthetase.
  
  
 0.763
KARS1
Lysyl-tRNA synthetase, class II.
  
  
 0.763
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.