STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TsaEUnannotated protein. (154 aa)    
Predicted Functional Partners:
TsaB
Unannotated protein.
 
 0.998
TsaD
Unannotated protein.
 
 0.995
GCA_000716755_01744
Unannotated protein.
  
 0.992
GCA_000716755_01743
Unannotated protein.
  
 
 0.889
GCA_000716755_01745
Unannotated protein.
       0.844
MiaA
Unannotated protein.
 
   
 0.684
SmpB
Unannotated protein.
 
   
 0.665
RimI
Unannotated protein.
  
  
 0.662
GCA_000716755_09036
Unannotated protein.
 
   
 0.599
GCA_000716755_04003
Unannotated protein.
    
 0.587
Your Current Organism:
Saccharothrix syringae
NCBI taxonomy Id: 103733
Other names: ATCC 51364, DSM 43886, IFO 14523, INA 2240, JCM 6844, NBRC 14523, NRRL B-16468, Nocardiopsis syringae, S. syringae
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.