STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716755_02680Unannotated protein. (633 aa)    
Predicted Functional Partners:
GCA_000716755_03748
Unannotated protein.
  
  
 
0.920
GCA_000716755_04775
Unannotated protein.
 
   
 0.794
GCA_000716755_00571
Unannotated protein.
     0.674
GCA_000716755_02681
Unannotated protein.
 
     0.646
GCA_000716755_00845
Unannotated protein.
 
   
 0.628
GCA_000716755_06938
Unannotated protein.
 
      0.552
GCA_000716755_03233
Unannotated protein.
  
     0.544
GCA_000716755_02682
Unannotated protein.
       0.543
GCA_000716755_02683
Unannotated protein.
       0.543
GCA_000716755_02684
Unannotated protein.
   
   0.504
Your Current Organism:
Saccharothrix syringae
NCBI taxonomy Id: 103733
Other names: ATCC 51364, DSM 43886, IFO 14523, INA 2240, JCM 6844, NBRC 14523, NRRL B-16468, Nocardiopsis syringae, S. syringae
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.