STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716755_03272Unannotated protein. (643 aa)    
Predicted Functional Partners:
GCA_000716755_03273
Unannotated protein.
 
     0.855
GCA_000716755_03271
Unannotated protein.
 
     0.839
GCA_000716755_00241
Unannotated protein.
 
     0.736
GCA_000716755_03267
Unannotated protein.
     0.660
GCA_000716755_03276
Unannotated protein.
 
     0.629
GCA_000716755_00176
Unannotated protein.
  
     0.572
GCA_000716755_03269
Unannotated protein.
 
     0.562
GCA_000716755_03277
Unannotated protein.
 
     0.551
GCA_000716755_03268
Unannotated protein.
       0.546
GCA_000716755_02734
Unannotated protein.
 
     0.508
Your Current Organism:
Saccharothrix syringae
NCBI taxonomy Id: 103733
Other names: ATCC 51364, DSM 43886, IFO 14523, INA 2240, JCM 6844, NBRC 14523, NRRL B-16468, Nocardiopsis syringae, S. syringae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.